Postdoctoral Fellow – Population Genomics Informatics
- Vector Genetics Lab at University of California Davis
- Location: Davis, CA
- Job Number: 7356645
- Posting Date: Newly posted
- Application Deadline: Open Until Filled
Job Description
Position Overview
We invite applications for a Postdoctoral Fellow in Population Genomics Informatics to join a multidisciplinary program preparing for the first ever field release of a low threshold genetically modified mosquito. This fellowship offers a rare opportunity to contribute to a globally visible translational milestone by developing the data and informatics systems that underpin large scale population genomics, field ecology, and mosquito borne disease control innovation.
The successful candidate will lead research at the intersection of genomics, data science, ecological monitoring, and regulatory grade data governance, shaping the informatics backbone of a pioneering field trial.
Key Responsibilities
• Develop and evaluate integrated data architectures linking field entomology, ecological covariates, sample metadata, and genomic outputs
• Build reproducible, scalable workflows supporting multi site field operations and high throughput sequencing
• Implement FAIR aligned data governance frameworks
• Prototype and test tools for field data capture, metadata validation, and cross dataset integration
• Publish high impact research on informatics methods, standards, and population genomics data systems and how these relate to the overall VGL mission concerning malaria
• Provide scientific mentorship to all VGL personnel who generate or handle data, including Postdoctoral Fellows, Staff Research Associates and students.
• Collaborate closely with field, wet lab, and computational teams across partner institutions
Required Qualifications
• PhD in bioinformatics, computational biology, population genetics, information science, or a related field
• Demonstrated experience with large scale genomic or ecological datasets
• Strong programming skills (e.g., Python, R, SQL) and experience with Linux/Unix command-line environments and Bash scripting
• Familiarity with workflow managers (Nextflow, Snakemake, CWL) and interactive data visualization tools like QuickSight (currently in use in our lab)
• Experience with cloud computing and reproducible research practices
• Strong communication skills and ability to work across multidisciplinary teams
Preferred Qualifications
• Experience with field site data, ecological covariates, or vector biology
• Knowledge of ontologies, metadata standards, and semantic data models
• Experience with LIMS, REDCap, ODK, or similar data capture systems
• Background in translational research, global health, or gene drive–related data systems
Why Join Us
This fellowship provides the opportunity to contribute to a first in the world field trial, shaping the scientific and operational foundations of a transformative vector control strategy. The fellow will gain experience in multi site data integration, regulatory grade data systems, and high impact translational genomics—while building a strong publication record in an emerging, high visibility domain. For additional information see VGL website: https://vectorgeneticslab.ucdavis.edu/
How to Apply
Please submit the following materials as a single PDF:
• Cover letter describing research interests and relevant experience
• Curriculum vitae
• Contact information for three references
Submit applications and address inquires with the subject line “INFORMATICS POSTDOC APPLICATION ‘26” to:
Mrs. Christine Coleman
Executive Assistant
Vector Genetics Laboratory
cmhandy@ucdavis.edu
We invite applications for a Postdoctoral Fellow in Population Genomics Informatics to join a multidisciplinary program preparing for the first ever field release of a low threshold genetically modified mosquito. This fellowship offers a rare opportunity to contribute to a globally visible translational milestone by developing the data and informatics systems that underpin large scale population genomics, field ecology, and mosquito borne disease control innovation.
The successful candidate will lead research at the intersection of genomics, data science, ecological monitoring, and regulatory grade data governance, shaping the informatics backbone of a pioneering field trial.
Key Responsibilities
• Develop and evaluate integrated data architectures linking field entomology, ecological covariates, sample metadata, and genomic outputs
• Build reproducible, scalable workflows supporting multi site field operations and high throughput sequencing
• Implement FAIR aligned data governance frameworks
• Prototype and test tools for field data capture, metadata validation, and cross dataset integration
• Publish high impact research on informatics methods, standards, and population genomics data systems and how these relate to the overall VGL mission concerning malaria
• Provide scientific mentorship to all VGL personnel who generate or handle data, including Postdoctoral Fellows, Staff Research Associates and students.
• Collaborate closely with field, wet lab, and computational teams across partner institutions
Required Qualifications
• PhD in bioinformatics, computational biology, population genetics, information science, or a related field
• Demonstrated experience with large scale genomic or ecological datasets
• Strong programming skills (e.g., Python, R, SQL) and experience with Linux/Unix command-line environments and Bash scripting
• Familiarity with workflow managers (Nextflow, Snakemake, CWL) and interactive data visualization tools like QuickSight (currently in use in our lab)
• Experience with cloud computing and reproducible research practices
• Strong communication skills and ability to work across multidisciplinary teams
Preferred Qualifications
• Experience with field site data, ecological covariates, or vector biology
• Knowledge of ontologies, metadata standards, and semantic data models
• Experience with LIMS, REDCap, ODK, or similar data capture systems
• Background in translational research, global health, or gene drive–related data systems
Why Join Us
This fellowship provides the opportunity to contribute to a first in the world field trial, shaping the scientific and operational foundations of a transformative vector control strategy. The fellow will gain experience in multi site data integration, regulatory grade data systems, and high impact translational genomics—while building a strong publication record in an emerging, high visibility domain. For additional information see VGL website: https://vectorgeneticslab.ucdavis.edu/
How to Apply
Please submit the following materials as a single PDF:
• Cover letter describing research interests and relevant experience
• Curriculum vitae
• Contact information for three references
Submit applications and address inquires with the subject line “INFORMATICS POSTDOC APPLICATION ‘26” to:
Mrs. Christine Coleman
Executive Assistant
Vector Genetics Laboratory
cmhandy@ucdavis.edu
